CDS
| Accession Number | TCMCG015C60882 |
| gbkey | CDS |
| Protein Id | XP_027097268.1 |
| Location | join(579818..579848,580061..580191,580634..580751,580846..581072,581783..581885,583663..583733,583892..583966,584047..584190,584333..584561,584767..585153,586945..587004,587080..587201,587790..587915,588767..588841,588939..589051,589992..590108,590197..590265,590350..590413) |
| Gene | LOC113716913 |
| GeneID | 113716913 |
| Organism | Coffea arabica |
Protein
| Length | 753aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA506972 |
| db_source | XM_027241467.1 |
| Definition | katanin p80 WD40 repeat-containing subunit B1 homolog isoform X1 [Coffea arabica] |
EGGNOG-MAPPER Annotation
| COG_category | Z |
| Description | May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko04812 [VIEW IN KEGG] |
| KEGG_ko |
ko:K18643
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs |
GO:0000151
[VIEW IN EMBL-EBI] GO:0005575 [VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0031461 [VIEW IN EMBL-EBI] GO:0032991 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0080008 [VIEW IN EMBL-EBI] GO:1902494 [VIEW IN EMBL-EBI] GO:1990234 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGACAACCACCAAACGTGCTTATAAGCTACAGGAATTTGTAGCTCATTCGCAGAGTGTCAACTGTCTCAAGATTGGGAGGAAATCCTCCAGGGTTCTGGTCACCGGAGGAGAAGATCACAAGGTTAATCTCTGGGCCATCGGCAAGCCCAATGCCGTTCTGAGCTTGTCTGGCCATTCAAGCGGAATAGATTCTGTTAGCTTTGATTCTTCAGAAGTGTTGGTAGCTGCTGGAGCTGCTAGTGGTACTATCAAGCTTTGGGATTTGGAGGAGGCCAAGATTGTTCGCACCCTCACTGGTCATCGATCAAACTGCATTTCTTTGGACTTTCATCCCTTTGGGGAGTTCTTTGCGTCTGGCTCCTTGGACACCAATTTAAAGATATGGGATATCAGAAGGAAAGGATGTATACACACTTACAAGGGGCACACTCGAGGTGTCAATGCCATCCGGTTTACACCAGATGGTCGTTGGGTTGTCTCTGGTGGAGAGGACAACACTGTGAAGCTGTGGGATTTAACAGCGGGAAAGCTGTTGCATGATTTTAAGTGTCATGATGGCCAGATTCAGTGCATTGATTTTCATCCCCATGAGTTCCTGCTGGCAACAGGTTCAGCTGACAAAACTGTGAAATTTTGGGATCTTGAAACGTTTGAACTGATAGGCTCTTCTGGGCCTGAGACCACAGGAGTGCGTTGCATGACTTTTAATCCTGATGGTAAAACGCTTCTCTGTGGGCTGCACGAGAGCTTGAAGGTTTACTCTTGGGAACCAATCCGCTGTCATGATACAGTCGACGTAGGGTGGTCAAGATTGTCTGACCTTAGTATTGATGAAGGAAAGCTTCTTGGATGTTCATATAACCAGAGTTGTGTCGGCGTATGGGTTGTAGACATCTCTCGAATTGAGCCTTATGCGATGGGAAGCACAACTCTGTTAAATGGCCAATCAGAAATGAAATCCGGTTCAAGTGGGAATCTGTCTGTGCCTGTTGAGGATATTGCTAAAGCCAGTTTGGGCAGGCTGTCCATTTCACAAAATTCAGATTCAGTAAAAGAAGCTAAATCTTCTGGTCGGCTTTCCACATCGCAAAACTCAGACCTCAACAAGGAATCTAAACCTCTTTCATCTACTGGAACTGTACCTGGTACTCCTCACAGGGTAAATCTTGGTGCTGGTCAAAAAGTTGCTCCAATTGGTAATGCAGTTGTTCCCAATGTAGCAGCCCCAAAGAGAAATGCTGTAAAAGTCCAGCCAGTGGCTACCACTTCAATCATCAACAGGTCAGACGTGATACCTGTGGTTGTCCCACGAAATAATTTGAGGTTCGAACAGGCAGCAGAATCAAGGAAAGAGGGAATCATTGCAAGAACAATGCCATTATCCTTGCAATCAAGAGGATCTTCTAATATCAGAGATGAAATTGAGAGGCCAATTGCTTCTCCAAAGCCTGAAAGTCAGGTTGCAAAGGCAGCTGATTTGAGTGGACTTACAGAAAGGAAGACTATTCCTGCAGATGAAACTCGTGGTCCAAATGTTAATAGAGAATCAAATATGAGTGAAGGTAAAAGAGCAGGAAGAACACGTTCGCTGGTTGCCAACTGGGAGAGGAGAGAGAGAGTAACTTATAGTGACGGTCTTGCCACCAGCAATATTCCTGTGACAATTCATGCCATAAACACTCGAACAACTAGTGTGGGAGGCCAGACTTTAACACCTGAAAGTGAGATGGTTTCTACTAGTGAAGAGGATGTTATTGCTGACTTGATGAAACATCATGACGAATTTGTTGGCTCAATGCATTCACGTTTAATTAAATTGCAGATGATCCATAACCACTGGCAAAGGCATGATGTTAAAGGTGCCCTTAGTGCAATGGAGAAGATGGGCGATCACGGAGTCATTGCTGATGTAATAAGCCTTGTGACAGAAAAAGCTGATATTGTAACATTAGATATCTGCACCTGTCTCCTGCCACTTCTCAATGGGCTTCTTGAAAGTGAGATGGACAGGCATCAAAATATCTCATTGGAGATGCTTCTGAAGCTGGTCAGAGTATTTGGGTCAGTAATATATTCTTCTATATCAGCACCTTCATCCGTAGGAGTGGATATTGAGGCAGAGCAAAGGTTGGAACGCTGCAATACATGCTTTGTTGAGCTTGAAAAGGTTAAGCGTTGCTTGCCTGTACTTTGCAGAAGAGGTGGTTCAATTGCCAAGTCGGCACACGAGTTAAATCTAGCACTTCAAGAAGTTTCATGA |
| Protein: MTTTKRAYKLQEFVAHSQSVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAVLSLSGHSSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISLDFHPFGEFFASGSLDTNLKIWDIRRKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHDGQIQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSSGPETTGVRCMTFNPDGKTLLCGLHESLKVYSWEPIRCHDTVDVGWSRLSDLSIDEGKLLGCSYNQSCVGVWVVDISRIEPYAMGSTTLLNGQSEMKSGSSGNLSVPVEDIAKASLGRLSISQNSDSVKEAKSSGRLSTSQNSDLNKESKPLSSTGTVPGTPHRVNLGAGQKVAPIGNAVVPNVAAPKRNAVKVQPVATTSIINRSDVIPVVVPRNNLRFEQAAESRKEGIIARTMPLSLQSRGSSNIRDEIERPIASPKPESQVAKAADLSGLTERKTIPADETRGPNVNRESNMSEGKRAGRTRSLVANWERRERVTYSDGLATSNIPVTIHAINTRTTSVGGQTLTPESEMVSTSEEDVIADLMKHHDEFVGSMHSRLIKLQMIHNHWQRHDVKGALSAMEKMGDHGVIADVISLVTEKADIVTLDICTCLLPLLNGLLESEMDRHQNISLEMLLKLVRVFGSVIYSSISAPSSVGVDIEAEQRLERCNTCFVELEKVKRCLPVLCRRGGSIAKSAHELNLALQEVS |